CICADA
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Getting started
Dependencies
Installation
Install release from PyPI or from gitlab
Follow the latest updates
How to run
Download cicada codes
Overview
Introduction
Motivation
Supported data format
Functionalities
Software architecture
Analysis
Graphical User Interface
Data format
NWB Format
NWB pre-processing
Modules
How to use
Pre-processing
Data to NWB
Run preprocessing
NWB file class
Suite 2P ROIs
2D series
Calcium imaging movie
ABF
Utils
Appendix
Analysis
Main analysis class
Argument handler
Format wrapper
NWB wrapper
Cells count
Connectivity graph
Frames count
Hubs analysis
PSTH analysis
Annexe
GUI
Main Window
Filter/group sessions
Display metadata
Analysises list
Overview of analysises
Analysis parameters
CICADA
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